| SPARQL |
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SPARQL stands for SPARQL Protocol and RDF Query Language. It is standardized by the RDF Data Access Working Group (DAWG) of the W3C. It allows for a query to consist of triple patterns, conjunctions, disjunctions, and optional patterns. Querying CCO
The following form lets you query the Cell Cycle Ontology through a SPARQL endpoint hosted by the Systems Biology group at the Norwegian University of Science and Technology (NTNU). The underlying triplestore contains over 5 million RDF triples of cell cycle information. This information ranges from processes, interactions, proteins, genes, cellular compartments, and so forth, which were collected from diverse sources (like GO, UniProt, IntAct, etc.). Type your SPARQL query in the following text area, then click on 'Run Query'. A new window with the results will be opened. In case there is a syntax error in the query, it will be warned to you. (N.B. Recommended browsers: Firefox, Safari, Opera, or Konqueror. IE proposes to save the results instead of displaying them.) SPARQL queries against CCO are run on Virtuoso (OpenLink). This system provides an infrastructure for storing and querying CCO. Suggested GRAPHs: S. cerevisiae: <http://www.semantic-systems-biology.org/cco_S_cerevisiae> S. pombe : <http://www.semantic-systems-biology.org/cco_S_pombe> A. thaliana : <http://www.semantic-systems-biology.org/cco_A_thaliana> H. sapiens : <http://www.semantic-systems-biology.org/cco_H_sapiens> Entire CCO : <http://www.semantic-systems-biology.org/cco> External links
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| Last Updated on Tuesday, 28 April 2009 14:55 |